Rosacea: Genomic Classification


Taxon Id Species Name Genome size(Mb) CG (%) Annotation No. of genes No. of protein No. of contigs No. of scaffolds Nucleotide sequence Protein sequence 16s rRNA sequence
genome size, Corynebacterium kroppenstedtii 2.4468 57.5 Link 2108 2014 1 1 Link Link Corynebacterium kroppenstedtii strain DSM 44385 16S ribosomal RNA, par - Nucleotide - NCBI (nih.gov)
HRMT102 Cutibacterium acnes 2.54977 60.1523 Link 2502 2380 2 2 Link Link Cutibacterium acnes subsp. elongatum strain K124 16S ribosomal RNA, pa - Nucleotide - NCBI (nih.gov)
HRMT103 Cutibacterium granulosum 2.17524 64.2 Link 1850 1686 N.A. N.A. Link Link Cutibacterium granulosum DSM 20700 16S ribosomal RNA, partial sequence - Nucleotide - NCBI (nih.gov)
HRMT105 N.A. 2.58572 46.5 Link 2139 2012 34 6 Link Link Alloprevotella tannerae strain VPI N14B 16S ribosomal RNA gene, partia - Nucleotide - NCBI (nih.gov)
HRMT106 Dysgonomonas gadei 5.17609 39.6 Link 4132 4030 65 25 Link Link Dysgonomonas gadei ATCC BAA-286 strain 1145589 16S ribosomal RNA, part - Nucleotide - NCBI (nih.gov)
HRMT107 Porphyromonas endodontalis 2.08372 47.5 Link 1783 1685 2 2 Link Link Porphyromonas endodontalis strain ATCC 35406 16S ribosomal RNA, partia - Nucleotide - NCBI (nih.gov)
HRMT109 Azorhizobium doebereinerae 5.81751 68.9 Link 5426 5214 107 104 Link Link Azorhizobium doebereinerae strain BR5401 16S ribosomal RNA, partial se - Nucleotide - NCBI (nih.gov)
HRMT110 Ochrobactrum grignonense/Brucella grignonensis 4.93482 54.1 Link 4598 4411 169 169 Link Link [Ochrobactrum] soli strain BO-7 16S ribosomal RNA, partial sequence - Nucleotide - NCBI (nih.gov)
HRMT112 Roseomonas mucosa 4.99843 70.308 Link 4610 4426 5 5 Link Link Roseomonas mucosa strain MDA5527 16S ribosomal RNA, partial sequence - Nucleotide - NCBI (nih.gov)
HRMT113 Duganella zoogloeoides 6.27295 63.7 N.A. N.A. N.A. 27 23 N.A. N.A. N.A.
HRMT114 Shewanella algae 4.84401 53 Link 4450 4271 1 1 Link Link Shewanella algae strain OK-1 16S ribosomal RNA, partial sequence - Nucleotide - NCBI (nih.gov)
HRMT115 Providencia stuartii 4.63933 40.3 Link 4336 4213 185 185 Link Link Providencia stuartii strain ATCC 29914 16S ribosomal RNA, partial sequ - Nucleotide - NCBI (nih.gov)
HRMT116 Serratia marcescens 5.22621 59.7 Link 5034 4880 2 2 Link Link Serratia marcescens strain KRED 16S ribosomal RNA, partial sequence - Nucleotide - NCBI (nih.gov)
HRMT118 Acinetobacter pittii 3.86253 38.8 Link 3674 3599 1 1 Link Link Acinetobacter pittii DSM 21653 strain CIP 70.29 16S ribosomal RNA, par - Nucleotide - NCBI (nih.gov)
HRMT120 Campylobacter ureolyticus 1.74059 28.9 Link 1827 1748 37 35 Link Link Campylobacter ureolyticus DSM 20703 16S ribosomal RNA, partial sequenc - Nucleotide - NCBI (nih.gov)
HRMT123 Staphylococcus hominisÿ 2.25 31.4 Link 2254 2137 3 3 Link Link Staphylococcus hominis strain DM 122 16S ribosomal RNA, partial sequen - Nucleotide - NCBI (nih.gov)
HRMT124 Streptococcus oralis 1.93155 41.5 Link 1870 1777 1 1 Link Link Streptococcus oralis Hiva gene for 16S rRNA, partial sequence - Nucleotide - NCBI (nih.gov)
HRMT125 Ruminococcus gnavusÿ 3.54919 42.9 Link 3547 3391 1 1 Link Link [Ruminococcus] gnavus ATCC 29149 16S ribosomal RNA, partial sequence - Nucleotide - NCBI (nih.gov)