Psoriasis: Genomic Classification


Taxon Id Species Name Genome size(Mb) CG (%) Annotation No. of genes No. of protein No. of contigs No. of scaffolds Nucleotide sequence Protein sequence 16s rRNA sequence
HPMT142 Tepidiphilus thermophilus 2.25982 66.2 Link 2264 2160 37 35 Link Link Tepidiphilus thermophilus strain JHK30 16S ribosomal RNA, partial sequ - Nucleotide - NCBI (nih.gov)
HPMT143 staphylococcus capitis 2.50685 32.8 Link 2383 2280 16 16 Link Link Staphylococcus capitis subsp. urealyticus strain MAW 8436 16S ribosoma - Nucleotide - NCBI (nih.gov)
HPMT144 Corynebacterium aurimucosum 2.81923 60.5248 Link 2661 2536 2 2 Link Link Corynebacterium aurimucosum strain IMMIB D-1488 16S ribosomal RNA, par - Nucleotide - NCBI (nih.gov)
HPMT145 Corynebacterium pseudogenitalium 2.60143 59.5 N.A. 2483 2384 16 9 N.A. N.A. Corynebacterium pseudogenitalium partial 16S rRNA gene, strain BDLI12 - Nucleotide - NCBI (nih.gov)
HPMT146 Bacteroides neonati 5.02533 43.5 Link 4304 4120 35 18 Link Link Bacteroides kribbi strain R2F3-3-3 16S ribosomal RNA, partial sequence - Nucleotide - NCBI (nih.gov)
HPMT147 Staphylococcus aureus 2.82136 32.9 Link 2872 2767 1 1 Link Link Staphylococcus aureus strain ATCC 12600 16S ribosomal RNA, complete se - Nucleotide - NCBI (nih.gov)
HPMT148 Staphylococcus aureus 2.82136 32.9 Link 2872 2767 1 1 Link Link Staphylococcus aureus strain ATCC 12600 16S ribosomal RNA, complete se - Nucleotide - NCBI (nih.gov)
HPMT149 Staphylococcus schweitzeri 2.78494 32.4 Link 2685 2556 1 1 Link Link N.A.
HPMT162 Candidatus Arthromitus 1.52978 28 N.A. N.A. N.A. N.A. N.A. N.A. N.A. Candidatus Arthromitus sp. SFB-mouse gene for 16S rRNA, partial sequen - Nucleotide - NCBI (nih.gov)
HPMT178 Firmicutes bacterium M10-2 2.40752 40.7 N.A. 2342 2269 62 22 N.A. N.A. N.A.
HPMT179 Lachnospiraceae bacterium A4 6.9619 44.6 N.A. 6624 6549 193 40 N.A. N.A. Lachnospiraceae bacterium A4 16S ribosomal RNA gene, partial sequence - Nucleotide - NCBI (nih.gov)
HPMT180 Firmicutes bacterium M10-2 2.40752 40.7 N.A. 2342 2269 62 22 N.A. N.A. N.A.
HPMT182 Firmicutes bacterium M10-2 2.40752 40.7 N.A. 2342 2269 62 22 N.A. N.A. N.A.
HPMT185 Firmicutes bacterium M10-2 2.40752 40.7 N.A. 2342 2269 62 22 N.A. N.A. N.A.
HPMT189 Chlamydia abortus 1.14923 39.7553 Link 1023 961 2 2 Link Link Chlamydia abortus strain Ov/B577 16S ribosomal RNA, partial sequence - Nucleotide - NCBI (nih.gov)
HPMT190 Staphylococcus auricularis 2.25151 37.2 Link 2128 1985 N.A. N.A. Link Link Staphylococcus auricularis strain WK 811M 16S ribosomal RNA, partial s - Nucleotide - NCBI (nih.gov)
HPMT191 Chlamydia abortus 1.14923 39.7553 Link 1023 961 2 2 Link Link Chlamydia abortus strain Ov/B577 16S ribosomal RNA, partial sequence - Nucleotide - NCBI (nih.gov)
HPMT192 Chlamydia abortus 1.14923 39.7553 Link 1023 961 2 2 Link Link Chlamydia abortus strain Ov/B577 16S ribosomal RNA, partial sequence - Nucleotide - NCBI (nih.gov)
HPMT193 Chlamydia abortus 1.14923 39.7553 Link 1023 961 2 2 Link Link Chlamydia abortus strain Ov/B577 16S ribosomal RNA, partial sequence - Nucleotide - NCBI (nih.gov)
HPMT195 Deinococcus-Thermus 3.70899 68 N.A. N.A. N.A. N.A. N.A. N.A. N.A. N.A.
HPMT201 Occallatibacter savannae 6.27858 59.1 Link 5226 5135 18 18 Link Link Occallatibacter savannae strain A2-1c 16S ribosomal RNA, partial seque - Nucleotide - NCBI (nih.gov)
HPMT202 Fusobacterium mortiferum 2.82258 29.2 Link 2765 2646 4 4 Link Link Fusobacterium mortiferum strain DSM 19809 16S ribosomal RNA, partial s - Nucleotide - NCBI (nih.gov)
HPMT205 Mangrovibacter yixingensis 4.98307 49.7 Link 4633 4457 25 25 Link Link Mangrovibacter yixingensis strain TULL-A 16S ribosomal RNA, partial se - Nucleotide - NCBI (nih.gov)
HPMT208 Neisseria elongata 2.39728 53.9 Link 2362 2221 1 1 Link Link Neisseria elongata subsp. elongata strain ATCC 25295 16S ribosomal RNA - Nucleotide - NCBI (nih.gov)
HPMT209 Deinococcus-Thermus 3.70899 68 N.A. N.A. N.A. N.A. N.A. N.A. N.A. N.A.
HPMT210 Fusobacterium nucleatum 2.45506 26.9878 Link 2397 2299 2 2 Link Link Fusobacterium nucleatum subsp. vincentii strain SOR 16S ribosomal RNA, - Nucleotide - NCBI (nih.gov)
HPMT212 Delftia acidovorans 6.77796 66.6 Link 6176 6053 6 1 Link Link Delftia acidovorans strain IAM 12409 16S ribosomal RNA, partial sequen - Nucleotide - NCBI (nih.gov)
HPMT213 Paracoccus siganidrum 4.90399 67.9 Link 4864 4683 N.A. N.A. Link Link Paracoccus siganidrum strain M26 16S ribosomal RNA, partial sequence - Nucleotide - NCBI (nih.gov)
HPMT214 Sphingobium sufflavum 4.43002 64.9 Link 4103 3976 37 37 Link Link Sphingobium sufflavum strain HL-25 16S ribosomal RNA, partial sequence - Nucleotide - NCBI (nih.gov)
HPMT215 Leptotrichia hongkongensis 2.28418 29.9273 Link 2227 2129 2 2 Link Link Leptotrichia hongkongensis strain HKU24 16S ribosomal RNA, partial seq - Nucleotide - NCBI (nih.gov)
HPMT216 Occallatibacter savannae 6.27858 59.1 Link 5226 5135 18 18 Link Link Occallatibacter savannae strain A2-1c 16S ribosomal RNA, partial seque - Nucleotide - NCBI (nih.gov)
HPMT219 Cutibacterium acnes 2.54977 60.1523 Link 2505 2380 2 2 Link Link Cutibacterium acnes subsp. elongatum strain K124 16S ribosomal RNA, pa - Nucleotide - NCBI (nih.gov)
HPMT222 Moraxella osloensis 2.64914 43.5846 Link 2372 2247 5 5 Link Link Moraxella osloensis strain A1920 16S ribosomal RNA, partial sequence - Nucleotide - NCBI (nih.gov)
HPMT224 Staphylococcus haemolyticus 2.56015 32.7831 Link 2521 2376 2 2 Link Link Staphylococcus haemolyticus strain SM 131 16S ribosomal RNA, partial s - Nucleotide - NCBI (nih.gov)
HPMT225 Megasphaera elsdenii DSM 20460 2.56619 52.7 Link 2417 2319 1 1 Link Link Megasphaera elsdenii DSM 20460 16S ribosomal RNA, partial sequence - Nucleotide - NCBI (nih.gov)
HPMT226 Brevundimonas aurantiaca 3.22945 67.4 Link 3198 3110 27 27 Link Link Brevundimonas aurantiaca strain CB-R 16S ribosomal RNA, partial sequen - Nucleotide - NCBI (nih.gov)
HPMT230 Paraburkholderia susongensis 7.719 63.3 Link 6958 6736 34 33 Link Link Paraburkholderia susongensis strain L226 16S ribosomal RNA, partial se - Nucleotide - NCBI (nih.gov)
HPMT231 Staphylococcus auricularis 2.21658 37.4 Link 2128 1985 1 1 Link Link Staphylococcus auricularis strain WK 811M 16S ribosomal RNA, partial s - Nucleotide - NCBI (nih.gov)
HPMT233 Roseicitreum antarcticum 4.25002 63.1269 Link 4124 3871 N.A. N.A. Link Link Roseicitreum antarcticum strain ZS2-28 16S ribosomal RNA, partial sequ - Nucleotide - NCBI (nih.gov)
HPMT234 Delftia acidovorans 6.77796 66.6 Link 6176 6053 6 1 Link Link Delftia acidovorans strain IAM 12409 16S ribosomal RNA, partial sequen - Nucleotide - NCBI (nih.gov)